Single-Cell Model Hub

A curated collection of foundation models, virtual cells, and AI systems for single-cell biology — papers, code, and resources.

All Models Foundation Model Geneformer-like Virtual Cell Multi-modal Spatial Perturbation Generative Other
#Cell Atlas #Cross-species #Foundation Model #GPT #Gene Expression #Geneformer #Generative #Masked Modeling #Multi-omics #Perturbation #Spatial #Transformer #Virtual Cell #WeChat #scBERT #scFoundation #scGPT #scRNA-seq

Generative

1
TranscriptFormer
Generative

TranscriptFormer

TranscriptFormer 用 5.4 亿参数、1.12 亿个细胞、12 个物种，在 one transformer 里读懂了从酵母到人类的"细胞通用语法"——跨物种细胞分类、零样本疾病识别、系统发育树涌现，单细胞大模型正式从"全基因组时代"跨入了"全演化树时代"

542 M params Paper → GitHub →