Single-Cell Model Hub

scBaseCount

AI-powered automated curation platform for 500M+ single-cell data.

Cell2Sentence

SATURN (Species Alignment Through Unification of Rna and proteiNs)

scFoundation

Large-scale pre-trained model for single-cell transcriptomics with 100M parameters, trained on 50M+ cells.

scGPT

Generative pre-trained transformer for single-cell biology. Pre-trained on 33M+ cells from CELLxGENE.

UCE: Universal Cell Embeddings

蛋白质语言模型+基因共表达双编码器，构建跨物种通用细胞嵌入空间

UCE

Universal Cell Embedding — species-agnostic cell representation model for cross-species analysis.

SATURN

Cross-species single-cell foundation model using protein language models.

CELLxGENE Census Models

Foundation models from CZI, trained on CELLxGENE Census data (50M+ cells).

scBERT

BERT-based pre-trained model for single-cell transcriptomics with gene-level tokenization.

Stack

In-context learning of single-cell biology