Single-Cell Model Hub

A curated collection of foundation models, virtual cells, and AI systems for single-cell biology — papers, code, and resources.

All Models Foundation Model Geneformer-like Virtual Cell Multi-modal Spatial Perturbation Generative Other
#Cell Atlas #Cross-species #Foundation Model #GPT #Gene Expression #Geneformer #Generative #Masked Modeling #Multi-omics #Perturbation #Spatial #Transformer #Virtual Cell #scBERT #scFoundation #scGPT #scRNA-seq

#Transformer

1
Foundation Model

scGPT

Generative pre-trained transformer for single-cell biology. Pre-trained on 33M+ cells from CELLxGENE.

2024 · 02 ~300M params Paper → GitHub →
Foundation Model Gene Expression Transformer scGPT