Single-Cell Model Hub

A curated collection of foundation models, virtual cells, and AI systems for single-cell biology — papers, code, and resources.

All Models Foundation Model Geneformer-like Virtual Cell Multi-modal Spatial Perturbation Generative Other
#Cell Atlas #Cross-species #Foundation Model #GPT #Gene Expression #Geneformer #Generative #Masked Modeling #Multi-omics #Perturbation #Spatial #Transformer #Virtual Cell #scBERT #scFoundation #scGPT #scRNA-seq

#Cell Atlas

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Foundation Model

CELLxGENE Census Models

Foundation models from CZI, trained on CELLxGENE Census data (50M+ cells).

2023 · 07 Paper → GitHub →
Cell Atlas Foundation Model Gene Expression scRNA-seq